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A compilation and categorization of alternative splicing resources

GenomeScan

Tool nameGenomeScan
URLhttp://genes.mit.edu/genomescan.html
Important featuresPredicts the locations and exon-intron structures of genes in genomic sequences from a variety of organisms.
CitationsYeh RF, Lim LP, Burge CB. Computational inference of homologous gene structures in the human genome. Genome Res. 2001 May;11(5):803-16. PubMed PMID:11337476; PubMed Central PMCID: PMC311055.
Year of publication2001
Rank by usage frequency100
CommentsNo output result obtained. PS file not supported on server and PDF file shown blank
FunctionSpecies, Finds alternative splicing in Arabidopsis, Finds alternative splicing in other species
Category
Input file formatnucleotide sequence in FASTA format and a protein sequence with similarity to the genomic sequence submitted
Output file format
Limitation

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